Entry - *308380 - INTERLEUKIN 2 RECEPTOR, GAMMA; IL2RG - OMIM
 
* 308380

INTERLEUKIN 2 RECEPTOR, GAMMA; IL2RG


Alternative titles; symbols

INTERLEUKIN RECEPTOR, COMMON GAMMA CHAIN
INTERLEUKIN RECEPTOR, GAMMA-C
CD132 ANTIGEN; CD132


HGNC Approved Gene Symbol: IL2RG

Cytogenetic location: Xq13.1     Genomic coordinates (GRCh38): X:71,107,404-71,111,577 (from NCBI)


Gene-Phenotype Relationships
Location Phenotype Phenotype
MIM number
Inheritance Phenotype
mapping key
Xq13.1 Combined immunodeficiency, X-linked, moderate 312863 XLR 3
Severe combined immunodeficiency, X-linked 300400 XLR 3

TEXT

Description

Cytokines are potent, soluble mediators that regulate homeostasis of the immune system. IL2RG is known as the interleukin receptor common gamma chain, or gamma-c, because it heterodimerizes with at least 6 unique cytokine-specific interleukin receptor alpha chains, IL2RA (147730), IL4RA (147781), IL7RA (146661), IL9RA (300007), IL15RA (601070), and IL21RA (605383), to form distinct receptor complexes for the cytokines IL2 (147680), IL4 (147780), IL7 (146660), IL9 (146931), IL15 (600554), and IL21 (605384), respectively. The IL2 and IL21 receptor complexes are heterotrimers that also include a shared beta chain, IL2RB/IL15RB (146710) (Brandt et al., 2007).


Cloning and Expression

IL2 affects the growth and differentiation of T cells, B cells, natural killer cells, glioma cells, and cells of the monocyte lineage after specifically interacting with its receptors. The IL2 receptor (IL2R) consists of 2 subunits, alpha (IL2RA) and beta (IL2RB). Takeshita et al. (1992) identified a third IL2R subunit, the gamma chain, and isolated the corresponding cDNA from a human T-cell line. The deduced 369-amino acid protein has a molecular mass of 39.9 kD and shows sequence similarity to members of the cytokine receptor family. Northern blot analysis detected a dominant 1.8-kb mRNA transcript in human T and B cells; a second 3.6-kb mRNA transcript was also detected. No IL2RG mRNA transcripts were detected in human nonlymphoid cells, such as promonocytes, epithelial cells, or hepatocytes.

Noguchi et al. (1993) found that the IL2RG protein, like the IL2RB protein, contains 2 pairs of conserved cysteines typical of cytokine receptor superfamily proteins.


Gene Structure

Noguchi et al. (1993) determined that the IL2RG gene contains 8 exons and spans approximately 4.2 kb. Southern blot analysis suggested that the gene is present in single copy.

Puck et al. (1993) sequenced the IL2RG gene and elucidated its genomic organization.


Mapping

By study of somatic cell hybrids, Noguchi et al. (1993) and Puck et al. (1993) independently mapped the IL2RG gene to chromosome Xq13. Relationships to markers in linkage studies suggested that IL2RG and XSCID, the locus for X-linked severe combined immunodeficiency (300400), had the same location. By fluorescence in situ hybridization and PCR amplification of somatic cell hybrid DNAs, Puck et al. (1993) mapped IL2RG to Xq13.1.

Cao et al. (1993) localized the murine Il2rg gene to the X chromosome between Rsvp and Plp and demonstrated that a defect in the gene is not responsible for the X-linked xid mutation, which maps to the same region; see 300300.


Gene Function

Functional expression studies by Takeshita et al. (1992) showed that the IL2 receptor gamma chain was necessary for formation of high- and intermediate-affinity IL2 receptors, which consist of alpha-beta-gamma heterotrimers and beta-gamma heterodimers, respectively. Takeshita et al. (1992) concluded that the gamma chain is an indispensable component of the functional IL2 receptor.

The gamma subunit of the IL2 receptor is a subunit also of the IL4 receptor and of the IL7 receptor, i.e., it is a shared or common component of at least 3 cytokine receptors. The designation 'common gamma chain' (gamma-c) was proposed (Kondo et al., 1993; Noguchi et al., 1993; Russell et al., 1993).

Russell et al. (1993) suggested that the gamma-c subunit may be shared with the interleukin-9 receptor. The sharing of the gamma subunit by several receptors explained why humans and mice that lack IL2 entirely show milder symptoms than those with IL2RG deficiency.

Sharfe et al. (1997) stated that the gamma-c chain is shared by 5 interleukin receptor complexes: IL2, IL4, IL7, IL9, and IL15.

Asao et al. (2001) showed that IL21 binds to IL21R in IL2RG-deficient cell lines, but fails to transduce signals. In cell lines expressing IL2RG, binding and activation of JAK1 (147795), JAK3 (600173), STAT1 (600555), and STAT3 (102582) occurs, indicating that IL2RG is an indispensable subunit of the functional IL21R complex.

Lamaze et al. (2001) selectively blocked clathrin (see 118960)-dependent endocytosis using dominant-negative mutants of EPS15 (600051) and showed that clathrin-mediated endocytosis of transferrin (190000) was inhibited, while endocytosis of the IL2Rs proceeded normally. Ultrastructural and biochemical experiments showed that clathrin-independent endocytosis of IL2Rs existed constitutively in lymphocytes and was coupled to their association with detergent-resistant membrane domains. Clathrin-independent endocytosis required dynamin (see 602377) and was specifically regulated by Rho family GTPases (see 604980). These results defined novel properties of receptor-mediated endocytosis and established that IL2R is efficiently internalized through this clathrin-independent pathway.

Using flow cytometry, Corrigall et al. (2001) detected expression of a functional IL2R of intermediate affinity composed solely of IL2RB and IL2RG on fibroblast-like synoviocytes (FLS) obtained from rheumatoid arthritis and osteoarthritis patients. Addition of recombinant IL2, IL1B (147720), or TNFA (191160) independently did not upregulate expression of the receptors on FLS, but IL2 or IL1B significantly increased expression of intracellular tyrosine-phosphorylated proteins and the production of MCP1 (158105). Corrigall et al. (2001) proposed that MCP1 in the synovial membrane serves to recruit macrophages and perpetuate inflammation in the joints of patients with rheumatoid arthritis.


Biochemical Features

Crystal Structure

Wang et al. (2005) reported the crystal structure of the quaternary complex of IL2 with IL2RA, IL2RB, and IL2RG at a resolution of 2.3 angstroms.

LaPorte et al. (2008) reported the crystal structures of the complete set of IL4 and IL13 (147683) type I (IL4RA/IL2RG/IL4) and type II (IL4RA/IL13RA1/IL4 and IL4RA/IL13RA1/IL13) ternary signaling complexes at the 3.0-angstrom level. They noted that the type I receptor complex is more active in regulating Th2 development, whereas the type II receptor complex is not found on T cells and is more active in regulating cells that mediate airway hypersensitivity and mucus secretion. The type I complex revealed a structural basis for the ability of IL2RG to recognize 6 different IL2RG cytokines.


Molecular Genetics

In 3 unrelated patients with X-linked severe combined immunodeficiency (300400), Noguchi et al. (1993) identified 3 different mutations in the IL2RG gene (308380.0001-308380.0003).

In 4 unrelated affected males with SCID Puck et al. (1993) identified unique mutations in the IL2RG gene (308380.0004-308380.0007).

Pepper et al. (1995) found that of 40 IL2RG mutations found in unrelated SCID males, 6 were point mutations at the CpG dinucleotide at cDNA residues 690-691 encoding amino acid arg226. This residue lies in the extracellular domain of the protein in a region not previously recognized to be significantly conserved in the cytokine receptor gene family, 11 amino acids upstream from the highly conserved WSXWS motif. Three additional instances of mutation at another CpG dinucleotide at cDNA residue 879 produced a premature termination signal in the intracellular domain of IL2RG, resulting in loss of the SH2-homologous intracellular domain known to be essential for signaling from the IL2 receptor complex. Pepper et al. (1995) stated that mutations at these 2 hotspots constituted more than 20% of all XSCID mutations.

Leonard (1996) provided a review of the molecular basis of X-linked SCID with a listing of the mutations identified in the IL2RG gene. Fugmann et al. (1998) studied the IL2RG gene in 31 patients with SCID. Among 11 patients with XSCID, 10 different mutations were identified in the IL2RG gene, including 8 novel mutations.

In a patient with X-linked combined immunodeficiency (312863), Sharfe et al. (1997) identified a mutation in the IL2RG gene (308380.0012), which resulted in a protein that was sufficiently stable to be expressed at the cell surface. Although clinically immunodeficient, the patient had normal numbers of peripheral T and B cells, responded normally to mitogenic stimuli, and had a normal thymus gland. While the T-cell receptor repertoire appeared complete, suggesting normal T-cell differentiation, the patient's T cells demonstrated a reduced ability to bind IL2, resulting in immunodeficiency.

Cacalano and Johnston (1999) reviewed IL2 signaling in relation to inherited immunodeficiency. Formal genetic proof that the IL2R components are critical for T-cell development came with the identification of patients lacking either IL2RG or JAK3 (600173). These patients presented with phenotypically identical T-negative/B-positive/NK-negative SCID, inherited as an X-linked recessive or an autosomal recessive (600802) disorder, respectively.

Yu et al. (2014) performed deep sequencing on complementarity-determining region-3 (CDR3) of T-cell receptor (TCR)-beta (see 186930) in CD4 (186940)-positive and CD8 (see 186910)-positive T cells from 2 patients with RAG1 (179615) or IL2RG mutations and autoimmunity and/or granulomatous disease, but not severe immunodeficiency (see 233650 for information on the RAG1-associated phenotype); 5 patients with Omenn syndrome (603554) caused by RAG1 or RAG2 (179616) mutations; 2 patients with Omenn syndrome-like phenotypes caused by a ZAP70 (176947) mutation (see 269840) or by atypical DiGeorge syndrome (188400); and 4 healthy controls. They found that patients with Omenn syndrome due to RAG1 or RAG2 mutations had poor TCR-beta diversity compared with controls and patients with Omenn syndrome not due to RAG1 or RAG2 mutations. The 2 patients with RAG1 or IL2RG mutations associated with autoimmunity and granulomatous disease did not have diminished diversity, but instead had skewed V-J pairing and CDR3 amino acid use. Yu et al. (2014) concluded that RAG enzymatic function may be necessary for normal CDR3 junctional diversity and that aberrant TCR generation, but not numeric diversity, may contribute to immune dysregulation in patients with hypomorphic forms of SCID.


ALLELIC VARIANTS ( 13 Selected Examples):

.0001 SEVERE COMBINED IMMUNODEFICIENCY, X-LINKED

IL2RG, LYS97TER
  
RCV000010699

In a patient with X-linked SCID (300400), Noguchi et al. (1993) identified an A-to-T transversion in exon 3 of the IL2RG gene, resulting in a lys97-to-ter (K97X) substitution and a truncation of the C-terminal 251 amino acids of the interleukin-2 receptor gamma chain.


.0002 SEVERE COMBINED IMMUNODEFICIENCY, X-LINKED

IL2RG, ARG267TER
  
RCV000030058...

In a patient with X-linked SCID (300400), Noguchi et al. (1993) identified a C-to-T transition in exon 7 of the IL2RG gene, resulting in an arg267-to-ter (R267X) substitution and truncation of 81 amino acids of the protein.


.0003 SEVERE COMBINED IMMUNODEFICIENCY, X-LINKED

IL2RG, SER286TER
  
RCV000010701

In a patient with X-linked SCID (300400), Noguchi et al. (1993) identified a C-to-A transversion in exon 7 of the IL2RG gene, resulting in a ser286-to-ter (S286X) substitution and the truncation of 62 amino acids of the protein. This patient became known as Bubble Boy David because he lived in an isolation bubble in Houston for a long time and his disease became known as Bubble Boy disease. His early clinical course and immune function were reported by South et al. (1977) and Shearer et al. (1985). A male sib was also affected. His immunodeficiency was characterized by panhypogammaglobulinemia, lymphopenia with diminished T cells (varying from 10 to 40% over 12 years), elevated B cells, and essentially absent proliferation to mitogens or antigens. Following T-depleted haploidentical bone marrow transplantation from his sister, there was no improvement in immune function. He died 124 days posttransplant from an EBV-associated lymphoproliferative syndrome.


.0004 SEVERE COMBINED IMMUNODEFICIENCY, X-LINKED

IL2RG, CYS62TER
  
RCV000010702

In a patient with X-linked SCID (300400), Puck et al. (1993) identified a 200T-A transversion in exon 2 of the IL2RG gene, resulting in a cys62-to-ter (C62X) substitution.


.0005 SEVERE COMBINED IMMUNODEFICIENCY, X-LINKED

IL2RG, GLY114ASP
  
RCV000010703

In a patient with X-linked SCID (300400), Puck et al. (1993) identified a 355G-A transition in exon 3 of the IL2RG gene, resulting in a gly114-to-asp (G114D) substitution.


.0006 SEVERE COMBINED IMMUNODEFICIENCY, X-LINKED

IL2RG, IVS3DS, G-A, +1
  
RCV000010704

In a boy with X-linked SCID (300400) and no detectable IL2RG mRNA, Puck et al. (1993) identified a G-to-A transition in the first position of the splice donor site of intron 3 of the IL2RG gene.


.0007 SEVERE COMBINED IMMUNODEFICIENCY, X-LINKED

IL2RG, ILE153ASN
  
RCV000010705

In a boy with X-linked SCID (300400), Puck et al. (1993) identified a 472T-A transversion in exon 4 of the IL2RG gene, resulting in an ile153-to-asn (I153N) substitution.


.0008 COMBINED IMMUNODEFICIENCY, X-LINKED

IL2RG, LEU271GLN
  
RCV000010706...

In 3 affected males with X-linked combined immunodeficiency (XCID; 312863), which is phenotypically milder than X-linked severe combined immunodeficiency (300400), Schmalstieg et al. (1995) identified a leu271-to-gln (L271Q) substitution in exon 7 of the IL2RG gene. A normal brother did not have the mutation.


.0009 SEVERE COMBINED IMMUNODEFICIENCY, X-LINKED

IL2RG, 9-BP DUP, GLN-HIS-TRP INS
  
RCV000010707

By genetic linkage studies in a large Canadian pedigree with XSCID (300400), Puck et al. (1995) found the source of the mutation in the proband's grandmother. Despite her having 1 affected son and 2 carrier daughters with skewed X inactivation, her T cells did not show the expected skewed inactivation. Single-strand conformation polymorphism analysis of IL2RG in the affected proband demonstrated an abnormality in exon 5; sequencing demonstrated a 9-nucleotide in-frame duplication-insertion resulting in a duplication of 3 extracellular amino acids (glutamine, histidine, and tryptophan) just adjacent to and including the first tryptophan of the WSXWS motif found in all members of the cytokine receptor gene superfamily. The 3 additional amino acids were inserted just before residue 235. Mutation detection in the pedigree confirmed that the founder grandmother's somatic cells had only normal IL2RG, and that the SCID-associated X-chromosome haplotype was inherited by 3 daughters, 1 with a wildtype IL2RG gene and 2 others with the insertional mutation. The findings indicated that the grandmother had germline mosaicism, an unusual finding in females. This X-linked SCID family emphasized the limitations of genetic diagnosis by linkage as compared with direct mutation analysis.


.0010 SEVERE COMBINED IMMUNODEFICIENCY, X-LINKED

IL2RG, CYS115ARG
  
RCV000010708

In a male infant in whom XSCID (300400) was suspected at 1 year of age, Stephan et al. (1996) identified a 343T-C transition in exon 3 of the IL2RG gene, resulting in a cys115-to-arg (C115R) substitution. The patient's mother was heterozygous for the mutation. A maternal uncle and a maternal granduncle had died of pneumonia at ages 4 months and 6 months, respectively. The affected child had BCG vaccination at the age of 2 weeks. At 6 months of age, he was hospitalized for severe interstitial pneumonia. Physical examination at 1 year of age showed no signs of graft-versus-host disease (GVHD; see 614395) and no abnormalities except for a large abscess in the left lumbar region from which acid-fast bacilli with genetic characteristics of the Calmette-Guerin bacillus were identified. Immunologic investigations showed a normal number of T cells, a high B-cell count, and hypogammaglobulinemia with no detectable specific antibody responses. The skin test for purified protein derivative was positive and there were at least attenuated proliferative responses to antigens and mitogens. These unusual findings led to genetic analysis which showed that the gamma chain of IL2R was not expressed in the patient's B cells. Because of the unexpected presence of circulating mature T cells, Stephan et al. (1996) sorted and analyzed the patient's CD3+ T cells for expression of the gamma-c chain. Surprisingly, expression of this chain by T cells with either the CD4+ or CD8+ phenotype was normal, and sequencing of the IL2RG gene revealed the wildtype sequence at position 343. In contrast, the sorted CD19+ B cells, the sorted CD14+ monocytes, and the polymorphonuclear-cell population had no detectable expression of the gamma-c chain on their surface and contained the C115R mutation. The possibility that the patient's circulating T-cell population was derived from the engraftment of T cells in the mother in utero was excluded by T-cell karyotyping and HLA typing. In addition, the X chromosome present in the patient's T-cell and B-cell populations was assessed by study of 2 microsatellites flanking the IL2RG locus. These cell populations had only 1 X chromosome derived from the mother with the same X chromosome present in both T-cell and B-cell populations. Stephan et al. (1996) suggested that a single reversion event had occurred in a T-cell progenitor that gave rise to a number of diversified T-cell clones.


.0011 SEVERE COMBINED IMMUNODEFICIENCY, X-LINKED

IL2RG, ARG285GLN
  
RCV000010709...

In a patient with T-, B+ X-linked SCID (300400), Clark et al. (1995) identified a 2943G-A transition in the IL2RG gene, resulting in an arg285-to-gln (R285Q) substitution.

Jones et al. (1997) noted that X-linked SCID is characterized by the absence, or very low numbers, of T cells, with normal or even high numbers of B cells. However, in a boy with SCID who had very low numbers of both B cells and T cells, Jones et al. (1997) identified the R285Q mutation. The patient's mother and a maternal aunt were both found to have unilateral X inactivation in their T cells. Jones et al. (1997) stated that in about one-third of the cases of typical SCIDX1, there is no previous family history. In these families, the suspicion of SCIDX1 is raised by the phenotype and may be confirmed by X inactivation in T cells and/or by mutation analysis. The authors cautioned that the unexpected finding of low B cells may mistakenly suggest an autosomal form of SCID.


.0012 COMBINED IMMUNODEFICIENCY, X-LINKED

IL2RG, ARG222CYS
  
RCV000010710...

In a 1-year-old Caucasian male with X-linked combined immunodeficiency (312863), Sharfe et al. (1997) identified an arg222-to-cys (R222C) mutation in the IL2RG gene. The mutation occurs in the extracellular domain of the protein, which was predicted to affect ligand binding. The authors noted that the mutation was distinctive in that the protein was stable enough to be expressed at the cell surface.


.0013 SEVERE COMBINED IMMUNODEFICIENCY, X-LINKED

IL2RG, LEU151PRO
  
RCV000010711

In a boy with a relatively mild form of X-linked SCID (300400), Speckmann et al. (2008) identified a 466T-C transition in the IL2RG gene, resulting in a leu151-to-pro (L151P) substitution. The mutation was inherited from his unaffected mother. Genetic analysis of peripheral blood cells in the patient showed a dual signal, with the wildtype IL2RG gene in T cells and a mutant IL2RG gene in B cells, NK cells, and granulocytes. The findings were consistent with reversion of the L151P mutation within a common T-cell precursor in the patient. The patient had normal T-cell function, despite low levels of T cells, and impaired B cell antibody response. Functional analysis with mutant IL2RG showed a poor response to IL2 in B cells. The absence of mutated T cells in the patient suggested that mutant IL2RG did not allow proper T-cell development. In addition, X-inactivation studies in the mother showed that her T cells exclusively expressed the wildtype allele. A similar patient with reversion of mutation in a T-cell progenitor was reported by Stephan et al. (1996) (see 308380.0010). However, Speckmann et al. (2008) noted that the patient reported by Stephan et al. (1996) ultimately showed a deteriorating course and required bone marrow stem cell transplantation at almost 7 years of age. The findings indicated that close immunologic surveillance is still needed in patients with mutation reversion.


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  28. Stephan, V., Wahn, V., Le Deist, F., Dirksen, U., Broker, B., Muller-Fleckenstein, I., Horneff, G., Schroten, H., Fischer, A., de Saint Basile, G. Atypical X-linked severe combined immunodeficiency due to possible spontaneous reversion of the genetic defect in T cells. New Eng. J. Med. 335: 1563-1567, 1996. [PubMed: 8900089, related citations] [Full Text]

  29. Takeshita, T., Asao, H., Ohtani, K., Ishii, N., Kumaki, S., Tanaka, N., Munakata, H., Nakamura, M., Sugamura, K. Cloning of the gamma chain of the human IL-2 receptor. Science 257: 379-382, 1992. [PubMed: 1631559, related citations] [Full Text]

  30. Wang, X., Rickert, M., Garcia, K. C. Structure of the quaternary complex of interleukin-2 with its alpha, beta, and gamma-c receptors. Science 310: 1159-1163, 2005. [PubMed: 16293754, related citations] [Full Text]

  31. Yu, X., Almeida, J., Darko, S., van der Burg, M., DeRavin, S. S., Malech, H., Gennery, A., Chinn, I., Markert, M. L., Douek, D. C., Milner, J. D. Human syndromes of immunodeficiency and dysregulation are characterized by distinct defects in T-cell receptor repertoire development. J. Allergy Clin. Immun. 133: 1109-1115, 2014. [PubMed: 24406074, images, related citations] [Full Text]


Paul J. Converse - updated : 1/23/2014
Cassandra L. Kniffin - updated : 3/9/2009
Paul J. Converse - updated : 5/5/2008
Paul J. Converse - updated : 3/21/2008
Paul J. Converse - updated : 1/10/2006
Cassandra L. Kniffin - reorganized : 10/28/2004
Ada Hamosh - updated : 2/2/2004
Victor A. McKusick - updated : 5/14/2002
Jane Kelly - updated : 1/25/2002
Paul J. Converse - updated : 10/22/2001
Paul J. Converse - updated : 4/27/2001
Stylianos E. Antonarakis - updated : 4/17/2001
Ada Hamosh - updated : 5/4/2000
Victor A. McKusick - updated : 2/2/2000
Victor A. McKusick - updated : 1/21/1999
Victor A. McKusick - updated : 2/3/1998
Victor A. McKusick - updated : 5/16/1997
Creation Date:
Victor A. McKusick : 4/13/1993
mcolton : 01/30/2015
mgross : 2/11/2014
mcolton : 1/23/2014
mgross : 12/16/2011
wwang : 3/18/2009
ckniffin : 3/9/2009
mgross : 5/5/2008
mgross : 3/21/2008
mgross : 4/4/2006
terry : 3/16/2006
mgross : 1/10/2006
carol : 10/28/2004
carol : 10/28/2004
terry : 10/28/2004
ckniffin : 10/27/2004
ckniffin : 10/27/2004
ckniffin : 10/20/2004
alopez : 2/2/2004
alopez : 11/10/2003
alopez : 6/10/2003
terry : 5/14/2002
carol : 2/15/2002
carol : 2/15/2002
terry : 1/25/2002
mgross : 10/22/2001
mgross : 4/27/2001
mgross : 4/17/2001
alopez : 5/4/2000
mgross : 2/2/2000
terry : 1/21/1999
dkim : 7/2/1998
terry : 6/4/1998
alopez : 5/21/1998
psherman : 5/20/1998
mark : 2/5/1998
terry : 2/3/1998
carol : 6/23/1997
mark : 5/26/1997
terry : 5/16/1997
terry : 2/13/1997
jamie : 12/17/1996
jamie : 12/6/1996
terry : 11/26/1996
terry : 11/6/1996
mark : 1/31/1996
mark : 9/10/1995
carol : 5/16/1994
terry : 4/21/1994
warfield : 3/31/1994
mimadm : 2/27/1994
carol : 12/6/1993

* 308380

INTERLEUKIN 2 RECEPTOR, GAMMA; IL2RG


Alternative titles; symbols

INTERLEUKIN RECEPTOR, COMMON GAMMA CHAIN
INTERLEUKIN RECEPTOR, GAMMA-C
CD132 ANTIGEN; CD132


HGNC Approved Gene Symbol: IL2RG

Cytogenetic location: Xq13.1     Genomic coordinates (GRCh38): X:71,107,404-71,111,577 (from NCBI)


Gene-Phenotype Relationships

Location Phenotype Phenotype
MIM number
Inheritance Phenotype
mapping key
Xq13.1 Combined immunodeficiency, X-linked, moderate 312863 X-linked recessive 3
Severe combined immunodeficiency, X-linked 300400 X-linked recessive 3

TEXT

Description

Cytokines are potent, soluble mediators that regulate homeostasis of the immune system. IL2RG is known as the interleukin receptor common gamma chain, or gamma-c, because it heterodimerizes with at least 6 unique cytokine-specific interleukin receptor alpha chains, IL2RA (147730), IL4RA (147781), IL7RA (146661), IL9RA (300007), IL15RA (601070), and IL21RA (605383), to form distinct receptor complexes for the cytokines IL2 (147680), IL4 (147780), IL7 (146660), IL9 (146931), IL15 (600554), and IL21 (605384), respectively. The IL2 and IL21 receptor complexes are heterotrimers that also include a shared beta chain, IL2RB/IL15RB (146710) (Brandt et al., 2007).


Cloning and Expression

IL2 affects the growth and differentiation of T cells, B cells, natural killer cells, glioma cells, and cells of the monocyte lineage after specifically interacting with its receptors. The IL2 receptor (IL2R) consists of 2 subunits, alpha (IL2RA) and beta (IL2RB). Takeshita et al. (1992) identified a third IL2R subunit, the gamma chain, and isolated the corresponding cDNA from a human T-cell line. The deduced 369-amino acid protein has a molecular mass of 39.9 kD and shows sequence similarity to members of the cytokine receptor family. Northern blot analysis detected a dominant 1.8-kb mRNA transcript in human T and B cells; a second 3.6-kb mRNA transcript was also detected. No IL2RG mRNA transcripts were detected in human nonlymphoid cells, such as promonocytes, epithelial cells, or hepatocytes.

Noguchi et al. (1993) found that the IL2RG protein, like the IL2RB protein, contains 2 pairs of conserved cysteines typical of cytokine receptor superfamily proteins.


Gene Structure

Noguchi et al. (1993) determined that the IL2RG gene contains 8 exons and spans approximately 4.2 kb. Southern blot analysis suggested that the gene is present in single copy.

Puck et al. (1993) sequenced the IL2RG gene and elucidated its genomic organization.


Mapping

By study of somatic cell hybrids, Noguchi et al. (1993) and Puck et al. (1993) independently mapped the IL2RG gene to chromosome Xq13. Relationships to markers in linkage studies suggested that IL2RG and XSCID, the locus for X-linked severe combined immunodeficiency (300400), had the same location. By fluorescence in situ hybridization and PCR amplification of somatic cell hybrid DNAs, Puck et al. (1993) mapped IL2RG to Xq13.1.

Cao et al. (1993) localized the murine Il2rg gene to the X chromosome between Rsvp and Plp and demonstrated that a defect in the gene is not responsible for the X-linked xid mutation, which maps to the same region; see 300300.


Gene Function

Functional expression studies by Takeshita et al. (1992) showed that the IL2 receptor gamma chain was necessary for formation of high- and intermediate-affinity IL2 receptors, which consist of alpha-beta-gamma heterotrimers and beta-gamma heterodimers, respectively. Takeshita et al. (1992) concluded that the gamma chain is an indispensable component of the functional IL2 receptor.

The gamma subunit of the IL2 receptor is a subunit also of the IL4 receptor and of the IL7 receptor, i.e., it is a shared or common component of at least 3 cytokine receptors. The designation 'common gamma chain' (gamma-c) was proposed (Kondo et al., 1993; Noguchi et al., 1993; Russell et al., 1993).

Russell et al. (1993) suggested that the gamma-c subunit may be shared with the interleukin-9 receptor. The sharing of the gamma subunit by several receptors explained why humans and mice that lack IL2 entirely show milder symptoms than those with IL2RG deficiency.

Sharfe et al. (1997) stated that the gamma-c chain is shared by 5 interleukin receptor complexes: IL2, IL4, IL7, IL9, and IL15.

Asao et al. (2001) showed that IL21 binds to IL21R in IL2RG-deficient cell lines, but fails to transduce signals. In cell lines expressing IL2RG, binding and activation of JAK1 (147795), JAK3 (600173), STAT1 (600555), and STAT3 (102582) occurs, indicating that IL2RG is an indispensable subunit of the functional IL21R complex.

Lamaze et al. (2001) selectively blocked clathrin (see 118960)-dependent endocytosis using dominant-negative mutants of EPS15 (600051) and showed that clathrin-mediated endocytosis of transferrin (190000) was inhibited, while endocytosis of the IL2Rs proceeded normally. Ultrastructural and biochemical experiments showed that clathrin-independent endocytosis of IL2Rs existed constitutively in lymphocytes and was coupled to their association with detergent-resistant membrane domains. Clathrin-independent endocytosis required dynamin (see 602377) and was specifically regulated by Rho family GTPases (see 604980). These results defined novel properties of receptor-mediated endocytosis and established that IL2R is efficiently internalized through this clathrin-independent pathway.

Using flow cytometry, Corrigall et al. (2001) detected expression of a functional IL2R of intermediate affinity composed solely of IL2RB and IL2RG on fibroblast-like synoviocytes (FLS) obtained from rheumatoid arthritis and osteoarthritis patients. Addition of recombinant IL2, IL1B (147720), or TNFA (191160) independently did not upregulate expression of the receptors on FLS, but IL2 or IL1B significantly increased expression of intracellular tyrosine-phosphorylated proteins and the production of MCP1 (158105). Corrigall et al. (2001) proposed that MCP1 in the synovial membrane serves to recruit macrophages and perpetuate inflammation in the joints of patients with rheumatoid arthritis.


Biochemical Features

Crystal Structure

Wang et al. (2005) reported the crystal structure of the quaternary complex of IL2 with IL2RA, IL2RB, and IL2RG at a resolution of 2.3 angstroms.

LaPorte et al. (2008) reported the crystal structures of the complete set of IL4 and IL13 (147683) type I (IL4RA/IL2RG/IL4) and type II (IL4RA/IL13RA1/IL4 and IL4RA/IL13RA1/IL13) ternary signaling complexes at the 3.0-angstrom level. They noted that the type I receptor complex is more active in regulating Th2 development, whereas the type II receptor complex is not found on T cells and is more active in regulating cells that mediate airway hypersensitivity and mucus secretion. The type I complex revealed a structural basis for the ability of IL2RG to recognize 6 different IL2RG cytokines.


Molecular Genetics

In 3 unrelated patients with X-linked severe combined immunodeficiency (300400), Noguchi et al. (1993) identified 3 different mutations in the IL2RG gene (308380.0001-308380.0003).

In 4 unrelated affected males with SCID Puck et al. (1993) identified unique mutations in the IL2RG gene (308380.0004-308380.0007).

Pepper et al. (1995) found that of 40 IL2RG mutations found in unrelated SCID males, 6 were point mutations at the CpG dinucleotide at cDNA residues 690-691 encoding amino acid arg226. This residue lies in the extracellular domain of the protein in a region not previously recognized to be significantly conserved in the cytokine receptor gene family, 11 amino acids upstream from the highly conserved WSXWS motif. Three additional instances of mutation at another CpG dinucleotide at cDNA residue 879 produced a premature termination signal in the intracellular domain of IL2RG, resulting in loss of the SH2-homologous intracellular domain known to be essential for signaling from the IL2 receptor complex. Pepper et al. (1995) stated that mutations at these 2 hotspots constituted more than 20% of all XSCID mutations.

Leonard (1996) provided a review of the molecular basis of X-linked SCID with a listing of the mutations identified in the IL2RG gene. Fugmann et al. (1998) studied the IL2RG gene in 31 patients with SCID. Among 11 patients with XSCID, 10 different mutations were identified in the IL2RG gene, including 8 novel mutations.

In a patient with X-linked combined immunodeficiency (312863), Sharfe et al. (1997) identified a mutation in the IL2RG gene (308380.0012), which resulted in a protein that was sufficiently stable to be expressed at the cell surface. Although clinically immunodeficient, the patient had normal numbers of peripheral T and B cells, responded normally to mitogenic stimuli, and had a normal thymus gland. While the T-cell receptor repertoire appeared complete, suggesting normal T-cell differentiation, the patient's T cells demonstrated a reduced ability to bind IL2, resulting in immunodeficiency.

Cacalano and Johnston (1999) reviewed IL2 signaling in relation to inherited immunodeficiency. Formal genetic proof that the IL2R components are critical for T-cell development came with the identification of patients lacking either IL2RG or JAK3 (600173). These patients presented with phenotypically identical T-negative/B-positive/NK-negative SCID, inherited as an X-linked recessive or an autosomal recessive (600802) disorder, respectively.

Yu et al. (2014) performed deep sequencing on complementarity-determining region-3 (CDR3) of T-cell receptor (TCR)-beta (see 186930) in CD4 (186940)-positive and CD8 (see 186910)-positive T cells from 2 patients with RAG1 (179615) or IL2RG mutations and autoimmunity and/or granulomatous disease, but not severe immunodeficiency (see 233650 for information on the RAG1-associated phenotype); 5 patients with Omenn syndrome (603554) caused by RAG1 or RAG2 (179616) mutations; 2 patients with Omenn syndrome-like phenotypes caused by a ZAP70 (176947) mutation (see 269840) or by atypical DiGeorge syndrome (188400); and 4 healthy controls. They found that patients with Omenn syndrome due to RAG1 or RAG2 mutations had poor TCR-beta diversity compared with controls and patients with Omenn syndrome not due to RAG1 or RAG2 mutations. The 2 patients with RAG1 or IL2RG mutations associated with autoimmunity and granulomatous disease did not have diminished diversity, but instead had skewed V-J pairing and CDR3 amino acid use. Yu et al. (2014) concluded that RAG enzymatic function may be necessary for normal CDR3 junctional diversity and that aberrant TCR generation, but not numeric diversity, may contribute to immune dysregulation in patients with hypomorphic forms of SCID.


ALLELIC VARIANTS 13 Selected Examples):

.0001   SEVERE COMBINED IMMUNODEFICIENCY, X-LINKED

IL2RG, LYS97TER
SNP: rs137852507, gnomAD: rs137852507, ClinVar: RCV000010699

In a patient with X-linked SCID (300400), Noguchi et al. (1993) identified an A-to-T transversion in exon 3 of the IL2RG gene, resulting in a lys97-to-ter (K97X) substitution and a truncation of the C-terminal 251 amino acids of the interleukin-2 receptor gamma chain.


.0002   SEVERE COMBINED IMMUNODEFICIENCY, X-LINKED

IL2RG, ARG267TER
SNP: rs137852508, ClinVar: RCV000030058, RCV000255488

In a patient with X-linked SCID (300400), Noguchi et al. (1993) identified a C-to-T transition in exon 7 of the IL2RG gene, resulting in an arg267-to-ter (R267X) substitution and truncation of 81 amino acids of the protein.


.0003   SEVERE COMBINED IMMUNODEFICIENCY, X-LINKED

IL2RG, SER286TER
SNP: rs137852509, gnomAD: rs137852509, ClinVar: RCV000010701

In a patient with X-linked SCID (300400), Noguchi et al. (1993) identified a C-to-A transversion in exon 7 of the IL2RG gene, resulting in a ser286-to-ter (S286X) substitution and the truncation of 62 amino acids of the protein. This patient became known as Bubble Boy David because he lived in an isolation bubble in Houston for a long time and his disease became known as Bubble Boy disease. His early clinical course and immune function were reported by South et al. (1977) and Shearer et al. (1985). A male sib was also affected. His immunodeficiency was characterized by panhypogammaglobulinemia, lymphopenia with diminished T cells (varying from 10 to 40% over 12 years), elevated B cells, and essentially absent proliferation to mitogens or antigens. Following T-depleted haploidentical bone marrow transplantation from his sister, there was no improvement in immune function. He died 124 days posttransplant from an EBV-associated lymphoproliferative syndrome.


.0004   SEVERE COMBINED IMMUNODEFICIENCY, X-LINKED

IL2RG, CYS62TER
SNP: rs111033619, ClinVar: RCV000010702

In a patient with X-linked SCID (300400), Puck et al. (1993) identified a 200T-A transversion in exon 2 of the IL2RG gene, resulting in a cys62-to-ter (C62X) substitution.


.0005   SEVERE COMBINED IMMUNODEFICIENCY, X-LINKED

IL2RG, GLY114ASP
SNP: rs111033620, ClinVar: RCV000010703

In a patient with X-linked SCID (300400), Puck et al. (1993) identified a 355G-A transition in exon 3 of the IL2RG gene, resulting in a gly114-to-asp (G114D) substitution.


.0006   SEVERE COMBINED IMMUNODEFICIENCY, X-LINKED

IL2RG, IVS3DS, G-A, +1
SNP: rs1569480018, ClinVar: RCV000010704

In a boy with X-linked SCID (300400) and no detectable IL2RG mRNA, Puck et al. (1993) identified a G-to-A transition in the first position of the splice donor site of intron 3 of the IL2RG gene.


.0007   SEVERE COMBINED IMMUNODEFICIENCY, X-LINKED

IL2RG, ILE153ASN
SNP: rs111033621, ClinVar: RCV000010705

In a boy with X-linked SCID (300400), Puck et al. (1993) identified a 472T-A transversion in exon 4 of the IL2RG gene, resulting in an ile153-to-asn (I153N) substitution.


.0008   COMBINED IMMUNODEFICIENCY, X-LINKED

IL2RG, LEU271GLN
SNP: rs137852510, gnomAD: rs137852510, ClinVar: RCV000010706, RCV001038281

In 3 affected males with X-linked combined immunodeficiency (XCID; 312863), which is phenotypically milder than X-linked severe combined immunodeficiency (300400), Schmalstieg et al. (1995) identified a leu271-to-gln (L271Q) substitution in exon 7 of the IL2RG gene. A normal brother did not have the mutation.


.0009   SEVERE COMBINED IMMUNODEFICIENCY, X-LINKED

IL2RG, 9-BP DUP, GLN-HIS-TRP INS
SNP: rs587776729, ClinVar: RCV000010707

By genetic linkage studies in a large Canadian pedigree with XSCID (300400), Puck et al. (1995) found the source of the mutation in the proband's grandmother. Despite her having 1 affected son and 2 carrier daughters with skewed X inactivation, her T cells did not show the expected skewed inactivation. Single-strand conformation polymorphism analysis of IL2RG in the affected proband demonstrated an abnormality in exon 5; sequencing demonstrated a 9-nucleotide in-frame duplication-insertion resulting in a duplication of 3 extracellular amino acids (glutamine, histidine, and tryptophan) just adjacent to and including the first tryptophan of the WSXWS motif found in all members of the cytokine receptor gene superfamily. The 3 additional amino acids were inserted just before residue 235. Mutation detection in the pedigree confirmed that the founder grandmother's somatic cells had only normal IL2RG, and that the SCID-associated X-chromosome haplotype was inherited by 3 daughters, 1 with a wildtype IL2RG gene and 2 others with the insertional mutation. The findings indicated that the grandmother had germline mosaicism, an unusual finding in females. This X-linked SCID family emphasized the limitations of genetic diagnosis by linkage as compared with direct mutation analysis.


.0010   SEVERE COMBINED IMMUNODEFICIENCY, X-LINKED

IL2RG, CYS115ARG
SNP: rs111033622, ClinVar: RCV000010708

In a male infant in whom XSCID (300400) was suspected at 1 year of age, Stephan et al. (1996) identified a 343T-C transition in exon 3 of the IL2RG gene, resulting in a cys115-to-arg (C115R) substitution. The patient's mother was heterozygous for the mutation. A maternal uncle and a maternal granduncle had died of pneumonia at ages 4 months and 6 months, respectively. The affected child had BCG vaccination at the age of 2 weeks. At 6 months of age, he was hospitalized for severe interstitial pneumonia. Physical examination at 1 year of age showed no signs of graft-versus-host disease (GVHD; see 614395) and no abnormalities except for a large abscess in the left lumbar region from which acid-fast bacilli with genetic characteristics of the Calmette-Guerin bacillus were identified. Immunologic investigations showed a normal number of T cells, a high B-cell count, and hypogammaglobulinemia with no detectable specific antibody responses. The skin test for purified protein derivative was positive and there were at least attenuated proliferative responses to antigens and mitogens. These unusual findings led to genetic analysis which showed that the gamma chain of IL2R was not expressed in the patient's B cells. Because of the unexpected presence of circulating mature T cells, Stephan et al. (1996) sorted and analyzed the patient's CD3+ T cells for expression of the gamma-c chain. Surprisingly, expression of this chain by T cells with either the CD4+ or CD8+ phenotype was normal, and sequencing of the IL2RG gene revealed the wildtype sequence at position 343. In contrast, the sorted CD19+ B cells, the sorted CD14+ monocytes, and the polymorphonuclear-cell population had no detectable expression of the gamma-c chain on their surface and contained the C115R mutation. The possibility that the patient's circulating T-cell population was derived from the engraftment of T cells in the mother in utero was excluded by T-cell karyotyping and HLA typing. In addition, the X chromosome present in the patient's T-cell and B-cell populations was assessed by study of 2 microsatellites flanking the IL2RG locus. These cell populations had only 1 X chromosome derived from the mother with the same X chromosome present in both T-cell and B-cell populations. Stephan et al. (1996) suggested that a single reversion event had occurred in a T-cell progenitor that gave rise to a number of diversified T-cell clones.


.0011   SEVERE COMBINED IMMUNODEFICIENCY, X-LINKED

IL2RG, ARG285GLN
SNP: rs111033617, gnomAD: rs111033617, ClinVar: RCV000010709, RCV003231098

In a patient with T-, B+ X-linked SCID (300400), Clark et al. (1995) identified a 2943G-A transition in the IL2RG gene, resulting in an arg285-to-gln (R285Q) substitution.

Jones et al. (1997) noted that X-linked SCID is characterized by the absence, or very low numbers, of T cells, with normal or even high numbers of B cells. However, in a boy with SCID who had very low numbers of both B cells and T cells, Jones et al. (1997) identified the R285Q mutation. The patient's mother and a maternal aunt were both found to have unilateral X inactivation in their T cells. Jones et al. (1997) stated that in about one-third of the cases of typical SCIDX1, there is no previous family history. In these families, the suspicion of SCIDX1 is raised by the phenotype and may be confirmed by X inactivation in T cells and/or by mutation analysis. The authors cautioned that the unexpected finding of low B cells may mistakenly suggest an autosomal form of SCID.


.0012   COMBINED IMMUNODEFICIENCY, X-LINKED

IL2RG, ARG222CYS
SNP: rs111033618, ClinVar: RCV000010710, RCV000622428, RCV001383439

In a 1-year-old Caucasian male with X-linked combined immunodeficiency (312863), Sharfe et al. (1997) identified an arg222-to-cys (R222C) mutation in the IL2RG gene. The mutation occurs in the extracellular domain of the protein, which was predicted to affect ligand binding. The authors noted that the mutation was distinctive in that the protein was stable enough to be expressed at the cell surface.


.0013   SEVERE COMBINED IMMUNODEFICIENCY, X-LINKED

IL2RG, LEU151PRO
SNP: rs137852511, ClinVar: RCV000010711

In a boy with a relatively mild form of X-linked SCID (300400), Speckmann et al. (2008) identified a 466T-C transition in the IL2RG gene, resulting in a leu151-to-pro (L151P) substitution. The mutation was inherited from his unaffected mother. Genetic analysis of peripheral blood cells in the patient showed a dual signal, with the wildtype IL2RG gene in T cells and a mutant IL2RG gene in B cells, NK cells, and granulocytes. The findings were consistent with reversion of the L151P mutation within a common T-cell precursor in the patient. The patient had normal T-cell function, despite low levels of T cells, and impaired B cell antibody response. Functional analysis with mutant IL2RG showed a poor response to IL2 in B cells. The absence of mutated T cells in the patient suggested that mutant IL2RG did not allow proper T-cell development. In addition, X-inactivation studies in the mother showed that her T cells exclusively expressed the wildtype allele. A similar patient with reversion of mutation in a T-cell progenitor was reported by Stephan et al. (1996) (see 308380.0010). However, Speckmann et al. (2008) noted that the patient reported by Stephan et al. (1996) ultimately showed a deteriorating course and required bone marrow stem cell transplantation at almost 7 years of age. The findings indicated that close immunologic surveillance is still needed in patients with mutation reversion.


See Also:

Cavazzano-Calvo et al. (2000); Dave et al. (2004); Hacein-Bey-Abina et al. (2002)

REFERENCES

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  7. Corrigall, V. M., Arastu, M., Khan, S., Shah, C., Fife, M., Smeets, T., Tak, P.-P., Panayi, G. S. Functional IL-2 receptor beta (CD122) and gamma (CD132) chains are expressed by fibroblast-like synoviocytes: activation by IL-2 stimulates monocyte chemoattractant protein-1 production. J. Immun. 166: 4141-4147, 2001. [PubMed: 11238664] [Full Text: https://doi.org/10.4049/jimmunol.166.6.4141]

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Contributors:
Paul J. Converse - updated : 1/23/2014
Cassandra L. Kniffin - updated : 3/9/2009
Paul J. Converse - updated : 5/5/2008
Paul J. Converse - updated : 3/21/2008
Paul J. Converse - updated : 1/10/2006
Cassandra L. Kniffin - reorganized : 10/28/2004
Ada Hamosh - updated : 2/2/2004
Victor A. McKusick - updated : 5/14/2002
Jane Kelly - updated : 1/25/2002
Paul J. Converse - updated : 10/22/2001
Paul J. Converse - updated : 4/27/2001
Stylianos E. Antonarakis - updated : 4/17/2001
Ada Hamosh - updated : 5/4/2000
Victor A. McKusick - updated : 2/2/2000
Victor A. McKusick - updated : 1/21/1999
Victor A. McKusick - updated : 2/3/1998
Victor A. McKusick - updated : 5/16/1997

Creation Date:
Victor A. McKusick : 4/13/1993

Edit History:
mcolton : 01/30/2015
mgross : 2/11/2014
mcolton : 1/23/2014
mgross : 12/16/2011
wwang : 3/18/2009
ckniffin : 3/9/2009
mgross : 5/5/2008
mgross : 3/21/2008
mgross : 4/4/2006
terry : 3/16/2006
mgross : 1/10/2006
carol : 10/28/2004
carol : 10/28/2004
terry : 10/28/2004
ckniffin : 10/27/2004
ckniffin : 10/27/2004
ckniffin : 10/20/2004
alopez : 2/2/2004
alopez : 11/10/2003
alopez : 6/10/2003
terry : 5/14/2002
carol : 2/15/2002
carol : 2/15/2002
terry : 1/25/2002
mgross : 10/22/2001
mgross : 4/27/2001
mgross : 4/17/2001
alopez : 5/4/2000
mgross : 2/2/2000
terry : 1/21/1999
dkim : 7/2/1998
terry : 6/4/1998
alopez : 5/21/1998
psherman : 5/20/1998
mark : 2/5/1998
terry : 2/3/1998
carol : 6/23/1997
mark : 5/26/1997
terry : 5/16/1997
terry : 2/13/1997
jamie : 12/17/1996
jamie : 12/6/1996
terry : 11/26/1996
terry : 11/6/1996
mark : 1/31/1996
mark : 9/10/1995
carol : 5/16/1994
terry : 4/21/1994
warfield : 3/31/1994
mimadm : 2/27/1994
carol : 12/6/1993