Entry - *312090 - SOLUTE CARRIER FAMILY 10 (SODIUM/BILE ACID COTRANSPORTER FAMILY) MEMBER 3; SLC10A3 - OMIM
 
* 312090

SOLUTE CARRIER FAMILY 10 (SODIUM/BILE ACID COTRANSPORTER FAMILY) MEMBER 3; SLC10A3


Alternative titles; symbols

PROTEIN P3


HGNC Approved Gene Symbol: SLC10A3

Cytogenetic location: Xq28     Genomic coordinates (GRCh38): X:154,487,311-154,490,629 (from NCBI)


TEXT

Cloning and Expression

Alcalay and Toniolo (1988) obtained a full-length SLC10A3 clone, which they called P3, from placenta and human teratocarcinoma cell cDNA libraries. The deduced protein contains 477 amino acids. Northern blot analysis detected variable expression of a 2.1-kb transcript in all cell lines examined. Southern blot analysis suggested that P3 is conserved from yeast to human.

In their review of the SLC10 family, Hagenbuch and Dawson (2004) stated that P3 has been categorized as a sodium-bile acid cotransporter and named SLC10A3 based on its similarity with SLC10A1 (182396) and SLC10A2 (601295). However, no verification of its transport function had been documented. EST database analysis suggested ubiquitous SLC10A3 expression.


Gene Structure

Alcalay and Toniolo (1988) determined that the SLC10A3 gene contains 2 exons and spans about 4 kb. The first exon is noncoding and is contained within a CpG island.


Mapping

Alcalay and Toniolo (1987) identified 2 expressed genes, P3 and GDX (312070), in the Xq28 band. Their location was established by the discovery of several overlapping lambda and cosmid clones that linked them to the G6PD gene (305900). The relationship of the 2 genes to each other and to G6PD is as follows: G6PD--3-prime--(7 kb)--5-prime--P3--3-prime--(0.5 kb)--5-prime--GDX.


REFERENCES

  1. Alcalay, M., Toniolo, D. Two new genes of the G6PD cluster on the long arm of the X chromosome. (Abstract) Cytogenet. Cell Genet. 46: 569 only, 1987.

  2. Alcalay, M., Toniolo, D. CpG islands of the X chromosome are gene associated. Nucleic Acids Res. 16: 9527-9543, 1988. [PubMed: 3186440, related citations] [Full Text]

  3. Hagenbuch, B., Dawson, P. The sodium bile salt cotransport family SLC10. Pflugers Arch. 447: 566-570, 2004. [PubMed: 12851823, related citations] [Full Text]


Contributors:
Patricia A. Hartz - updated : 3/12/2010
Creation Date:
Victor A. McKusick : 8/31/1987
carol : 03/09/2017
mgross : 03/15/2010
terry : 3/12/2010
mark : 7/5/1996
mimadm : 2/28/1994
carol : 8/31/1992
supermim : 3/17/1992
carol : 3/8/1992
supermim : 3/20/1990
ddp : 10/26/1989

* 312090

SOLUTE CARRIER FAMILY 10 (SODIUM/BILE ACID COTRANSPORTER FAMILY) MEMBER 3; SLC10A3


Alternative titles; symbols

PROTEIN P3


HGNC Approved Gene Symbol: SLC10A3

Cytogenetic location: Xq28     Genomic coordinates (GRCh38): X:154,487,311-154,490,629 (from NCBI)


TEXT

Cloning and Expression

Alcalay and Toniolo (1988) obtained a full-length SLC10A3 clone, which they called P3, from placenta and human teratocarcinoma cell cDNA libraries. The deduced protein contains 477 amino acids. Northern blot analysis detected variable expression of a 2.1-kb transcript in all cell lines examined. Southern blot analysis suggested that P3 is conserved from yeast to human.

In their review of the SLC10 family, Hagenbuch and Dawson (2004) stated that P3 has been categorized as a sodium-bile acid cotransporter and named SLC10A3 based on its similarity with SLC10A1 (182396) and SLC10A2 (601295). However, no verification of its transport function had been documented. EST database analysis suggested ubiquitous SLC10A3 expression.


Gene Structure

Alcalay and Toniolo (1988) determined that the SLC10A3 gene contains 2 exons and spans about 4 kb. The first exon is noncoding and is contained within a CpG island.


Mapping

Alcalay and Toniolo (1987) identified 2 expressed genes, P3 and GDX (312070), in the Xq28 band. Their location was established by the discovery of several overlapping lambda and cosmid clones that linked them to the G6PD gene (305900). The relationship of the 2 genes to each other and to G6PD is as follows: G6PD--3-prime--(7 kb)--5-prime--P3--3-prime--(0.5 kb)--5-prime--GDX.


REFERENCES

  1. Alcalay, M., Toniolo, D. Two new genes of the G6PD cluster on the long arm of the X chromosome. (Abstract) Cytogenet. Cell Genet. 46: 569 only, 1987.

  2. Alcalay, M., Toniolo, D. CpG islands of the X chromosome are gene associated. Nucleic Acids Res. 16: 9527-9543, 1988. [PubMed: 3186440] [Full Text: https://doi.org/10.1093/nar/16.20.9527]

  3. Hagenbuch, B., Dawson, P. The sodium bile salt cotransport family SLC10. Pflugers Arch. 447: 566-570, 2004. [PubMed: 12851823] [Full Text: https://doi.org/10.1007/s00424-003-1130-z]


Contributors:
Patricia A. Hartz - updated : 3/12/2010

Creation Date:
Victor A. McKusick : 8/31/1987

Edit History:
carol : 03/09/2017
mgross : 03/15/2010
terry : 3/12/2010
mark : 7/5/1996
mimadm : 2/28/1994
carol : 8/31/1992
supermim : 3/17/1992
carol : 3/8/1992
supermim : 3/20/1990
ddp : 10/26/1989